Scripts of the NMRPipe System
vina.tcl: Summarize TALOS predictions in a single table.

Flag Argument Default Description  -predDir pDir pred Directory of existing predictions.  -talosDir mDir . TALOS Main Directory: TALOS_DIR.  -in inName None Input shift table used previously.  -ref refName None Reference PDB for testing.  -sum sumName pred.tab Prediction summary output name.  -map mapName vina.dat Ramachandran Binary Map name.  -count mc 10 Max match count per triplet.  -dPhi phiDev 35.0 Max Allowable Phi Std Deviation.  -dPsi psiDev 35.0 Max Allowable Psi Std Deviation.  -lim limDeg 35.0 Limit for 'Near Test'.  -auto Automatic classification (Default).  -noauto No automatic classification. Examples:   vina.tcl -in ubiqCS.tab   vina.tcl -in ubiqCS.tab -ref xray.pdb See also:   talos.tcl Creates predictions by shift homology.   rama.tcl Graphical interface to inspect results.