Scripts of the NMRPipe System
fixPDB.tcl: Adjust a PDB for use in TALOS/DYNAMO database applications.

Flag Argument Default Description  -in inPDBName Input PDB File.  -out outPDBName Output PDB File.  -seg segName Segment Name for Output PDB.  -gmc gmcName GMC Directory Name, if Needed to Add Protons.  -gap maxPDBGap Maximum Allowable Missing Residue Count.  -addH Force Addition of Protons via DYNAMO Annealing.