NMRPipe System Programs nlinLS N-Dimension Lineshape Fitting

Command-Line Argument List

Program nlinLS, argument checking enabled.


Non-Linear N-Dimensional Spectral Modeling:
 nlinLS
  -in   inTable          Peak Table Input.
  -out  outTable         Peak Table Output.
  -data dataName         Datafile Name.
      OR
  -list listName         ND File List Name.
Optional:
  -w     widthList [2 ...]       +/- Points XYZ...
  -mod   modelList [GAUSS1D ...] Profile names.
  -mult  multName  [PEAK]        Multiplet type.
  -axis  axisOrder [XYZABC]      Axis Order List.
  -tol   relFnTol  [1.0e-08]     Func Tolerance.
  -dig   goodDig   [5]           Good Digits.
  -con   confidVal [0.95]        Confid Interval.
  -integ integLW   [3.0]         Integral +/- LW.
  -noise noiseRMS  [0.0]         Noise Estimate.
  -iter  maxIter   [-1]          Iteration count.
  -iseed seed      [54321]       Random Number Seed.
  -maxf  maxFnEval [-1]          Func Eval count.
  -tf    truncVal  [0.0]         Truncation factor.
  -vs    volScale  [1.0]         Volume Scale;
                                 volumes divided
                                 by this factor.
  -vol   volUnits  [Pts]         Linewidth Units
                                 for Volumes;
                                 use Pts Hz ppm
  -ppm             [No]          Update Hz/ppm Values.
  -sum             [No]          Volume by sum.
  -tau             [Yes]         Read Tau Values from Header.  -notau           [No]          Use Point Index as Tau.
  -norm            [Off]         Norm Test of Res.
  -verb            [Off]         Verbose mode on.
For Constrained Parameters:
  -fix    parm1 ...              Fixed parameters.
  -delta  parm1 X1 ...           Limits P-X1:P+X1.
  -delta2 parm1 X1 X2 ...        Limits P+X1:P+X2.
  -limit  parm1 X1 X2 ...        Limits P=X1:P=X2.
For TIME1D Profiles:
  -apod apodName             Filter List Name.
  -nots                      No Time-Domain Scale.
For MACRO1D Profiles:
 -macro macName parmCount [CLIP|NOCLIP] . . .
Optimization Modules:
 -f77                        Use F77 Modules.
 -yz                         Use Yamazaki Modules.
Supported Profile Names:
  GAUSS1D  LORENTZ1D TIME1D
  COS1D    SIN1D     DCOS1D
  DSIN1D   EXP1A1D   EXP2A1D
  EXP2AB1D GAUSS1A1D SCALE1D
  CTIME1D  GTIME1D   NULL1D
Supported Multiplet Types:
  PEAK JX JY JXY AX

NLinLS Error extracting command arguments.