NMRWish Built-In TCL Functions
dynSurface: Compute the solvent-accessible surface.

Flag Argument Default Description
 -src pdbSrc Source of Structure.
 -r rad 1.4 Radius of Surface Probe.
 -v cVal rad Value Recorded for Contacts.
 -cube cubeSize 1.0 Size of Indexing Cube.
 -tol probeTol 0.1 Tolerance for Overlap Test.
 -step stepSize 0.1 Step Size for Probe.
 -keep No Keep existing exposed info.
 -noset No Keep existing selection info.
  0. Returns: mass area volume
  1. The contact information will be stored in the temperature factor entries of the PDB table.
  2. This command resets the select ID of all atoms.

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last updated: Jul 24, 2011 / Webmaster