Scripts of the NMRPipe System
ss.tcl: Perform Secondary Structure and Hydrogen Bond Analysis on PDB File.
1. For info on DSSP: W. Kabsch and C.Sander, Biopolymers 22 (1983) 2577-2637
2. To include DSSP results as a column of the output, strip ! comments from the DSSP result, for example:
dssp ubiq.pdb | fgrep -v \! | ss.tcl -dssp -pdb ubiq.pdb -verb