From the Bax Group at the National Institutes of Health ... Optimization of N-H Vector Orientations in RNA Bases

Optimization of N-H Vector Orientations in RNA Bases Contact: Frank Delaglio delaglio@nih.gov

PDB Input: the server will optimize the N-H vector orientations of any paired RNA bases in the input, based on the heavy atom base-pairing geometries. A new version of the PDB file will be returned. Example: 1y26_noH.pdb Add All H Atoms: if this option is selected, H Atoms for all heavy atoms will be added by conventional means, then the N-H atom positions will be optimized.

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last update: Apr 2 2012